TRPC4AP

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Transient receptor potential cation channel, subfamily C, member 4 associated protein
Identifiers
Symbols TRPC4AP ; C20orf188; TRRP4AP; TRUSS
External IDs OMIM608430 MGI1930751 HomoloGene9224 GeneCards: TRPC4AP Gene
RNA expression pattern
PBB GE TRPC4AP 212059 s at tn.png
More reference expression data
Orthologs
Species Human Mouse
Entrez 26133 56407
Ensembl ENSG00000100991 ENSMUSG00000038324
UniProt Q8TEL6 Q9JLV2
RefSeq (mRNA) NM_015638 NM_001163452
RefSeq (protein) NP_056453 NP_001156924
Location (UCSC) Chr 20:
33.59 – 33.68 Mb
Chr 2:
155.63 – 155.69 Mb
PubMed search [1] [2]

Trpc4-associated protein is a protein that in humans is encoded by the TRPC4AP gene.


Model organisms

Model organisms have been used in the study of TRPC4AP function. A conditional knockout mouse line, called Trpc4aptm1a(KOMP)Wtsi67 was generated as part of the International Knockout Mouse Consortium program — a high-throughput mutagenesis project to generate and distribute animal models of disease to interested scientists.8910

Male and female animals underwent a standardized phenotypic screen to determine the effects of deletion.411 Twenty five tests were carried out on mutant mice and three significant abnormalities were observed.4 Few homozygous mutant embryos were identified during gestation, and thus fewer than expected survived until weaning. The remaining tests were carried out on heterozygous mutant adult mice; females had an abnormal anagen phase of the hair cycle.4

Interactions

TRPC4AP has been shown to interact with TNFRSF1A.12

See also

Further reading

References

  1. ^ "Dysmorphology data for Trpc4ap". Wellcome Trust Sanger Institute. 
  2. ^ "Salmonella infection data for Trpc4ap". Wellcome Trust Sanger Institute. 
  3. ^ "Citrobacter infection data for Trpc4ap". Wellcome Trust Sanger Institute. 
  4. ^ a b c d Gerdin AK (2010). "The Sanger Mouse Genetics Programme: High throughput characterisation of knockout mice". Acta Ophthalmologica 88: 925–7. doi:10.1111/j.1755-3768.2010.4142.x. 
  5. ^ Mouse Resources Portal, Wellcome Trust Sanger Institute.
  6. ^ "International Knockout Mouse Consortium". 
  7. ^ "Mouse Genome Informatics". 
  8. ^ Skarnes, W. C.; Rosen, B.; West, A. P.; Koutsourakis, M.; Bushell, W.; Iyer, V.; Mujica, A. O.; Thomas, M.; Harrow, J.; Cox, T.; Jackson, D.; Severin, J.; Biggs, P.; Fu, J.; Nefedov, M.; De Jong, P. J.; Stewart, A. F.; Bradley, A. (2011). "A conditional knockout resource for the genome-wide study of mouse gene function". Nature 474 (7351): 337–342. doi:10.1038/nature10163. PMC 3572410. PMID 21677750.  
  9. ^ Dolgin E (2011). "Mouse library set to be knockout". Nature 474 (7351): 262–3. doi:10.1038/474262a. PMID 21677718. 
  10. ^ Collins FS, Rossant J, Wurst W (2007). "A Mouse for All Reasons". Cell 128 (1): 9–13. doi:10.1016/j.cell.2006.12.018. PMID 17218247. 
  11. ^ van der Weyden L, White JK, Adams DJ, Logan DW (2011). "The mouse genetics toolkit: revealing function and mechanism.". Genome Biol 12 (6): 224. doi:10.1186/gb-2011-12-6-224. PMC 3218837. PMID 21722353. 
  12. ^ Soond, Surinder M; Terry Jennifer L, Colbert Jeff D, Riches David W H (Nov 2003). "TRUSS, a novel tumor necrosis factor receptor 1 scaffolding protein that mediates activation of the transcription factor NF-kappaB". Mol. Cell. Biol. (United States) 23 (22): 8334–44. doi:10.1128/MCB.23.22.8334-8344.2003. ISSN 0270-7306. PMC 262424. PMID 14585990. 










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